Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd1Q9D0E3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Syt7-205ENSMUST00000224135 1557 ntBASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd1Q9D0E3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Mir7684-201ENSMUST00000183858 60 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gm18622-201ENSMUST00000219361 595 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.56■□□□□ 0.4
Lysmd1Q9D0E3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Gm20553-201ENSMUST00000204205 844 ntBASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Gm7787-201ENSMUST00000216858 688 ntBASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Gm5779-201ENSMUST00000218467 910 ntBASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd1Q9D0E3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd1Q9D0E3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lysmd1Q9D0E3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms