Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn3Q9CVD2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn3Q9CVD2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm36967-201ENSMUST00000193814 266 ntBASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Gm10819-201ENSMUST00000099988 561 ntBASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atxn3Q9CVD2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn3Q9CVD2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Ank2-226ENSMUST00000189368 339 ntBASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn3Q9CVD2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.13■□□□□ 0.97
Atxn3Q9CVD2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn3Q9CVD2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms