Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Mir1668-201ENSMUST00000184114 107 ntBASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lrrc40Q9CRC8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm18421-201ENSMUST00000204122 625 ntBASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lrrc40Q9CRC8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.33■□□□□ 0.21
Lrrc40Q9CRC8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lrrc40Q9CRC8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.33■□□□□ 0.21
Lrrc40Q9CRC8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lrrc40Q9CRC8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrrc40Q9CRC8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Gm11336-201ENSMUST00000118168 334 ntBASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Gm29707-201ENSMUST00000196325 491 ntBASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Gm45058-201ENSMUST00000205810 766 ntBASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lrrc40Q9CRC8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.31■□□□□ 0.2
Lrrc40Q9CRC8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms