Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb1Q9CQ70 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Phf7-203ENSMUST00000226565 1971 ntBASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gm2274-201ENSMUST00000184539 609 ntBASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Gm5417-201ENSMUST00000079706 384 ntBASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb1Q9CQ70 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb1Q9CQ70 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Gm16061-201ENSMUST00000122167 857 ntBASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Gm27011-201ENSMUST00000182352 972 ntBASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb1Q9CQ70 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Gm30025-201ENSMUST00000218555 728 ntBASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Gm7370-201ENSMUST00000219471 767 ntBASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb1Q9CQ70 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms