Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim11Q99PQ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Gm44450-201ENSMUST00000199528 114 ntBASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim11Q99PQ2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim11Q99PQ2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim11Q99PQ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim11Q99PQ2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim11Q99PQ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim11Q99PQ2 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms