Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.11■□□□□ 0.17
Trim16Q99PP9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim16Q99PP9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.1■□□□□ 0.17
Trim16Q99PP9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim16Q99PP9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.09■□□□□ 0.17
Trim16Q99PP9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim16Q99PP9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.08■□□□□ 0.17
Trim16Q99PP9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.08■□□□□ 0.16
Trim16Q99PP9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.08■□□□□ 0.16
Trim16Q99PP9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim16Q99PP9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms