Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.26■□□□□ 0.83
Trim34aQ99PP6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Gm25990-201ENSMUST00000102440 86 ntBASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Gm13418-201ENSMUST00000119097 944 ntBASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34aQ99PP6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Mir5126-201ENSMUST00000175513 77 ntBASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Gm37935-201ENSMUST00000192012 982 ntBASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim34aQ99PP6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34aQ99PP6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Gm7230-201ENSMUST00000173026 815 ntBASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim34aQ99PP6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34aQ99PP6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms