Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44492-201ENSMUST00000197012 141 ntBASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh23Q99PF4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Gm2423-201ENSMUST00000074863 733 ntBASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh23Q99PF4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh23Q99PF4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh23Q99PF4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh23Q99PF4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.69■□□□□ 0.26
Cdh23Q99PF4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh23Q99PF4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Gm11424-201ENSMUST00000121929 829 ntBASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh23Q99PF4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Gm8825-201ENSMUST00000182565 998 ntBASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh23Q99PF4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms