Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim3Q99PE5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.09□□□□□ -0.15
Smim3Q99PE5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.09□□□□□ -0.15
Smim3Q99PE5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Smim3Q99PE5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smim3Q99PE5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Smim3Q99PE5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.08□□□□□ -0.16
Smim3Q99PE5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smim3Q99PE5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smim3Q99PE5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms