Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nkx6-1Q99MA9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm27628-201ENSMUST00000184911 107 ntBASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx6-1Q99MA9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx6-1Q99MA9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm13036-201ENSMUST00000117799 748 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm26308-201ENSMUST00000157768 69 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms