Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm11336-201ENSMUST00000118168 334 ntBASIC14.39□□□□□ -0.11
Scrt1Q99M85 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.39□□□□□ -0.11
Scrt1Q99M85 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.39□□□□□ -0.11
Scrt1Q99M85 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scrt1Q99M85 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
Scrt1Q99M85 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.38□□□□□ -0.11
Scrt1Q99M85 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.38□□□□□ -0.11
Scrt1Q99M85 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.38□□□□□ -0.11
Scrt1Q99M85 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scrt1Q99M85 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.38□□□□□ -0.11
Scrt1Q99M85 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.37□□□□□ -0.11
Scrt1Q99M85 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scrt1Q99M85 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Gm1401-201ENSMUST00000122048 772 ntBASIC14.36□□□□□ -0.11
Scrt1Q99M85 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.36□□□□□ -0.11
Scrt1Q99M85 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.36□□□□□ -0.11
Scrt1Q99M85 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scrt1Q99M85 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms