Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdk5rap3Q99LM2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdk5rap3Q99LM2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Gm8520-201ENSMUST00000186517 868 ntBASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdk5rap3Q99LM2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdk5rap3Q99LM2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdk5rap3Q99LM2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdk5rap3Q99LM2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms