Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Cttnbp2nlQ99LJ0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm27275-201ENSMUST00000184318 272 ntBASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cttnbp2nlQ99LJ0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Cttnbp2nlQ99LJ0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cttnbp2nlQ99LJ0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms