Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps4Q99KG7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps4Q99KG7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps4Q99KG7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps4Q99KG7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.29■□□□□ 0.68
Hps4Q99KG7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps4Q99KG7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hps4Q99KG7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps4Q99KG7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.27■□□□□ 0.68
Hps4Q99KG7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.27■□□□□ 0.68
Hps4Q99KG7 Gm2651-201ENSMUST00000203560 838 ntBASIC19.27■□□□□ 0.68
Hps4Q99KG7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hps4Q99KG7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps4Q99KG7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hps4Q99KG7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hps4Q99KG7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.26■□□□□ 0.67
Hps4Q99KG7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Gm7506-201ENSMUST00000207758 815 ntBASIC19.26■□□□□ 0.67
Hps4Q99KG7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.26■□□□□ 0.67
Hps4Q99KG7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps4Q99KG7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.25■□□□□ 0.67
Hps4Q99KG7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Hps4Q99KG7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Gm36967-201ENSMUST00000193814 266 ntBASIC19.25■□□□□ 0.67
Hps4Q99KG7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps4Q99KG7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.24■□□□□ 0.67
Hps4Q99KG7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hps4Q99KG7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms