Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.1■□□□□ 0.33
TrabdQ99JY4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Birc2-201ENSMUST00000054878 378 ntBASIC17.1■□□□□ 0.33
TrabdQ99JY4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TrabdQ99JY4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.09■□□□□ 0.33
TrabdQ99JY4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TrabdQ99JY4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TrabdQ99JY4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TrabdQ99JY4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.08■□□□□ 0.32
TrabdQ99JY4 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.08■□□□□ 0.32
TrabdQ99JY4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TrabdQ99JY4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TrabdQ99JY4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TrabdQ99JY4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.06■□□□□ 0.32
TrabdQ99JY4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.06■□□□□ 0.32
TrabdQ99JY4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TrabdQ99JY4 Gm44454-201ENSMUST00000198541 138 ntBASIC17.05■□□□□ 0.32
TrabdQ99JY4 Gm43347-201ENSMUST00000200226 580 ntBASIC17.05■□□□□ 0.32
TrabdQ99JY4 Gm34391-201ENSMUST00000203706 907 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms