Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd2Q99JR8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd2Q99JR8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Gm11594-201ENSMUST00000122313 162 ntBASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Psmb5-202ENSMUST00000227257 622 ntBASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd2Q99JR8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd2Q99JR8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Gm4459-201ENSMUST00000118750 468 ntBASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcd2Q99JR8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm8097-201ENSMUST00000117903 829 ntBASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm2213-201ENSMUST00000197485 688 ntBASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcd2Q99JR8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms