Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.38■□□□□ 0.69
Col20a1Q923P0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.38■□□□□ 0.69
Col20a1Q923P0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.38■□□□□ 0.69
Col20a1Q923P0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Rps4l-201ENSMUST00000071745 943 ntBASIC19.38■□□□□ 0.69
Col20a1Q923P0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.37■□□□□ 0.69
Col20a1Q923P0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.37■□□□□ 0.69
Col20a1Q923P0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col20a1Q923P0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Col20a1Q923P0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.36■□□□□ 0.69
Col20a1Q923P0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.36■□□□□ 0.69
Col20a1Q923P0 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.36■□□□□ 0.69
Col20a1Q923P0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col20a1Q923P0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col20a1Q923P0 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.34■□□□□ 0.69
Col20a1Q923P0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Gm11452-201ENSMUST00000122376 690 ntBASIC19.34■□□□□ 0.69
Col20a1Q923P0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.34■□□□□ 0.69
Col20a1Q923P0 Gm44771-201ENSMUST00000206975 626 ntBASIC19.34■□□□□ 0.69
Col20a1Q923P0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col20a1Q923P0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms