Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha2Q91Y17 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha2Q91Y17 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.52■□□□□ 0.4
Pcdha2Q91Y17 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha2Q91Y17 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha2Q91Y17 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdha2Q91Y17 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdha2Q91Y17 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Gm10819-201ENSMUST00000099988 561 ntBASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha2Q91Y17 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm13312-201ENSMUST00000119631 718 ntBASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms