Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm8097-201ENSMUST00000117903 829 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm7230-201ENSMUST00000173026 815 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac2Q91Y09 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Gm11780-201ENSMUST00000136880 516 ntBASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac2Q91Y09 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Psmb5-202ENSMUST00000227257 622 ntBASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac2Q91Y09 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhac2Q91Y09 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac2Q91Y09 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac2Q91Y09 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac2Q91Y09 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac2Q91Y09 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac2Q91Y09 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac2Q91Y09 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms