Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Gm44387-201ENSMUST00000196298 145 ntBASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Gm45166-201ENSMUST00000209073 683 ntBASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 CT025561.1-201ENSMUST00000214972 674 ntBASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb20Q91XZ9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gm28975-201ENSMUST00000186412 686 ntBASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.91■□□□□ 0.14
Pcdhb20Q91XZ9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb20Q91XZ9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb20Q91XZ9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Gm38170-201ENSMUST00000195404 816 ntBASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms