Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb4Q91XZ6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb4Q91XZ6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb4Q91XZ6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb4Q91XZ6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Gm27463-201ENSMUST00000183569 57 ntBASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb4Q91XZ6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb4Q91XZ6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb4Q91XZ6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms