Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb5Q91XZ5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Gm5867-201ENSMUST00000063197 592 ntBASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb5Q91XZ5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Gm1401-201ENSMUST00000122048 772 ntBASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb5Q91XZ5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb5Q91XZ5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb5Q91XZ5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdhb5Q91XZ5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Gm12350-201ENSMUST00000121208 462 ntBASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Gm36967-201ENSMUST00000193814 266 ntBASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb5Q91XZ5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms