Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Gm10252-201ENSMUST00000209541 832 ntBASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga3Q91XY5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Gm2274-201ENSMUST00000184539 609 ntBASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga3Q91XY5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Gm13216-201ENSMUST00000117145 591 ntBASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga3Q91XY5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.65□□□□□ -0.07
Pcdhga3Q91XY5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdhga3Q91XY5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.65□□□□□ -0.07
Pcdhga3Q91XY5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga3Q91XY5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms