Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga4Q91XY4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga4Q91XY4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhga4Q91XY4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga4Q91XY4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga4Q91XY4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Gm5587-201ENSMUST00000206270 674 ntBASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga4Q91XY4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga4Q91XY4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms