Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Gm20049-201ENSMUST00000219950 730 ntBASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhgb2Q91XX7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Il3ra-202ENSMUST00000223589 738 ntBASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhgb2Q91XX7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhgb2Q91XX7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhgb2Q91XX7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb2Q91XX7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb2Q91XX7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb2Q91XX7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhgb2Q91XX7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms