Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb17Q91VD8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 AC125539.1-202ENSMUST00000226449 670 ntBASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb17Q91VD8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhb17Q91VD8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhb17Q91VD8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb17Q91VD8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb17Q91VD8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb17Q91VD8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Gm37965-201ENSMUST00000195304 1362 ntBASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Gm35638-201ENSMUST00000220724 652 ntBASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb17Q91VD8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Gm38188-201ENSMUST00000192879 856 ntBASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Gm33142-201ENSMUST00000193913 867 ntBASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Gm42919-201ENSMUST00000197753 1284 ntBASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb17Q91VD8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms