Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa1Q8VEE4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Gm4968-201ENSMUST00000071458 858 ntBASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa1Q8VEE4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa1Q8VEE4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpa1Q8VEE4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms