Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm27742-201ENSMUST00000184667 60 ntBASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Sh3kbp1Q8R550 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Sh3kbp1Q8R550 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3kbp1Q8R550 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3kbp1Q8R550 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3kbp1Q8R550 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gm27357-201ENSMUST00000183754 135 ntBASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gm7461-201ENSMUST00000058918 827 ntBASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3kbp1Q8R550 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3kbp1Q8R550 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms