Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Gm10231-201ENSMUST00000181584 441 ntBASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Gm10175-202ENSMUST00000208752 441 ntBASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Top1mtQ8R4U6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Gm37722-201ENSMUST00000193757 208 ntBASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top1mtQ8R4U6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top1mtQ8R4U6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Top1mtQ8R4U6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top1mtQ8R4U6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms