Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Gm13036-201ENSMUST00000117799 748 ntBASIC23.25■■□□□ 1.31
Cd109Q8R422 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cd109Q8R422 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Cd109Q8R422 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC23.24■■□□□ 1.31
Cd109Q8R422 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Cd109Q8R422 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC23.24■■□□□ 1.31
Cd109Q8R422 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC23.24■■□□□ 1.31
Cd109Q8R422 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Gm37500-201ENSMUST00000192059 1443 ntBASIC23.23■■□□□ 1.31
Cd109Q8R422 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC23.23■■□□□ 1.31
Cd109Q8R422 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cd109Q8R422 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cd109Q8R422 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Cd109Q8R422 Gm11594-201ENSMUST00000122313 162 ntBASIC23.23■■□□□ 1.31
Cd109Q8R422 AC154222.1-201ENSMUST00000223882 475 ntBASIC23.23■■□□□ 1.31
Cd109Q8R422 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cd109Q8R422 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 AC159093.1-201ENSMUST00000227779 380 ntBASIC23.22■■□□□ 1.31
Cd109Q8R422 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cd109Q8R422 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC23.22■■□□□ 1.31
Cd109Q8R422 Gm3928-201ENSMUST00000121141 1307 ntBASIC23.21■■□□□ 1.31
Cd109Q8R422 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC23.21■■□□□ 1.31
Cd109Q8R422 Gm14140-201ENSMUST00000119999 995 ntBASIC23.21■■□□□ 1.31
Cd109Q8R422 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC23.21■■□□□ 1.31
Cd109Q8R422 Gm27628-201ENSMUST00000184911 107 ntBASIC23.21■■□□□ 1.31
Cd109Q8R422 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cd109Q8R422 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cd109Q8R422 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cd109Q8R422 Gm15743-202ENSMUST00000182690 1901 ntBASIC23.21■■□□□ 1.31
Cd109Q8R422 Gm43338-201ENSMUST00000198617 2223 ntBASIC23.21■■□□□ 1.31
Cd109Q8R422 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cd109Q8R422 Gm36858-201ENSMUST00000194501 2391 ntBASIC23.2■■□□□ 1.31
Cd109Q8R422 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Cd109Q8R422 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC23.2■■□□□ 1.31
Cd109Q8R422 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Gm7222-201ENSMUST00000117512 906 ntBASIC23.2■■□□□ 1.3
Cd109Q8R422 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC23.2■■□□□ 1.3
Cd109Q8R422 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cd109Q8R422 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gm5264-201ENSMUST00000190584 848 ntBASIC23.19■■□□□ 1.3
Cd109Q8R422 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gm43935-201ENSMUST00000203569 1050 ntBASIC23.19■■□□□ 1.3
Cd109Q8R422 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Cd109Q8R422 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cd109Q8R422 Gm4995-201ENSMUST00000117247 432 ntBASIC23.18■■□□□ 1.3
Cd109Q8R422 Gm6184-201ENSMUST00000120403 1261 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms