Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Gm19324-201ENSMUST00000213229 1169 ntBASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacnb1Q8R3Z5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacnb1Q8R3Z5 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cacnb1Q8R3Z5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacnb1Q8R3Z5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cacnb1Q8R3Z5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacnb1Q8R3Z5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm10231-201ENSMUST00000181584 441 ntBASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm10175-202ENSMUST00000208752 441 ntBASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cacnb1Q8R3Z5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Gm22038-201ENSMUST00000157277 242 ntBASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Gm37234-201ENSMUST00000193259 1441 ntBASIC18.57■□□□□ 0.56
Cacnb1Q8R3Z5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Gm7680-201ENSMUST00000216198 1348 ntBASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacnb1Q8R3Z5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms