Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Nup58Q8R332 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nup58Q8R332 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nup58Q8R332 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.64■□□□□ 0.41
Nup58Q8R332 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.64■□□□□ 0.41
Nup58Q8R332 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup58Q8R332 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.64■□□□□ 0.41
Nup58Q8R332 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.63■□□□□ 0.41
Nup58Q8R332 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.63■□□□□ 0.41
Nup58Q8R332 Il3ra-202ENSMUST00000223589 738 ntBASIC17.63■□□□□ 0.41
Nup58Q8R332 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup58Q8R332 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup58Q8R332 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup58Q8R332 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup58Q8R332 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup58Q8R332 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup58Q8R332 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.61■□□□□ 0.41
Nup58Q8R332 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Gm7638-201ENSMUST00000121348 967 ntBASIC17.61■□□□□ 0.41
Nup58Q8R332 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup58Q8R332 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nup58Q8R332 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup58Q8R332 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms