Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pspc1Q8R326 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.9■□□□□ 0.62
Pspc1Q8R326 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pspc1Q8R326 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pspc1Q8R326 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pspc1Q8R326 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pspc1Q8R326 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pspc1Q8R326 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pspc1Q8R326 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pspc1Q8R326 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Gm13216-201ENSMUST00000117145 591 ntBASIC18.88■□□□□ 0.61
Pspc1Q8R326 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.88■□□□□ 0.61
Pspc1Q8R326 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.88■□□□□ 0.61
Pspc1Q8R326 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pspc1Q8R326 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.87■□□□□ 0.61
Pspc1Q8R326 Gm13884-201ENSMUST00000118103 829 ntBASIC18.87■□□□□ 0.61
Pspc1Q8R326 Gm12644-201ENSMUST00000119935 606 ntBASIC18.87■□□□□ 0.61
Pspc1Q8R326 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.87■□□□□ 0.61
Pspc1Q8R326 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pspc1Q8R326 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.86■□□□□ 0.61
Pspc1Q8R326 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pspc1Q8R326 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.85■□□□□ 0.61
Pspc1Q8R326 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pspc1Q8R326 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms