Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Gm6623-201ENSMUST00000173570 544 ntBASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sf3a1Q8K4Z5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Gm17808-201ENSMUST00000200859 894 ntBASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sf3a1Q8K4Z5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sf3a1Q8K4Z5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Gm11950-201ENSMUST00000121615 838 ntBASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sf3a1Q8K4Z5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sf3a1Q8K4Z5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sf3a1Q8K4Z5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms