Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Alms1Q8K4E0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.05■□□□□ 0.16
Alms1Q8K4E0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.05■□□□□ 0.16
Alms1Q8K4E0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm25990-201ENSMUST00000102440 86 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gm2213-201ENSMUST00000197485 688 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alms1Q8K4E0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Gm15590-201ENSMUST00000078419 552 ntBASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alms1Q8K4E0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alms1Q8K4E0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms