Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim68Q8K243 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.82■□□□□ 0.44
Trim68Q8K243 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim68Q8K243 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim68Q8K243 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim68Q8K243 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim68Q8K243 Gm37935-201ENSMUST00000192012 982 ntBASIC17.82■□□□□ 0.44
Trim68Q8K243 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trim68Q8K243 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim68Q8K243 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim68Q8K243 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Gm18195-201ENSMUST00000207604 706 ntBASIC17.81■□□□□ 0.44
Trim68Q8K243 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim68Q8K243 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Trim68Q8K243 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.8■□□□□ 0.44
Trim68Q8K243 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.8■□□□□ 0.44
Trim68Q8K243 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim68Q8K243 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim68Q8K243 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.79■□□□□ 0.44
Trim68Q8K243 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim68Q8K243 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim68Q8K243 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim68Q8K243 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms