Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Gm13884-201ENSMUST00000118103 829 ntBASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab11fip3Q8CHD8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rab11fip3Q8CHD8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Gm18195-201ENSMUST00000207604 706 ntBASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip3Q8CHD8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip3Q8CHD8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.21■□□□□ 0.99
Rab11fip3Q8CHD8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Rab11fip3Q8CHD8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rab11fip3Q8CHD8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip3Q8CHD8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip3Q8CHD8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip3Q8CHD8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip3Q8CHD8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip3Q8CHD8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms