Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Gm43125-201ENSMUST00000201724 730 ntBASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rp1l1Q8CGM2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rp1l1Q8CGM2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 AA543401-201ENSMUST00000164248 1269 ntBASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rp1l1Q8CGM2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rp1l1Q8CGM2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm20949-201ENSMUST00000206478 952 ntBASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rp1l1Q8CGM2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rp1l1Q8CGM2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms