Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vcpip1Q8CDG3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vcpip1Q8CDG3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vcpip1Q8CDG3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vcpip1Q8CDG3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms