Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.3■□□□□ 0.2
Lrif1Q8CDD9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrif1Q8CDD9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrif1Q8CDD9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrif1Q8CDD9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrif1Q8CDD9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms