Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Gm10052-201ENSMUST00000168019 960 ntBASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Gm7729-201ENSMUST00000050143 801 ntBASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf31Q8CCF0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Gm44430-201ENSMUST00000203376 995 ntBASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf31Q8CCF0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Prpf31Q8CCF0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.95■□□□□ 0.46
Prpf31Q8CCF0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf31Q8CCF0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms