Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Prob1-201ENSMUST00000097619 3021 ntBASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Il3ra-202ENSMUST00000223589 738 ntBASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lysmd4Q8CC84 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lysmd4Q8CC84 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Gm12441-201ENSMUST00000121806 588 ntBASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lysmd4Q8CC84 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lysmd4Q8CC84 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms