Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Gm9103-201ENSMUST00000119371 405 ntBASIC19.18■□□□□ 0.66
Alx1Q8C8B0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Gm15372-201ENSMUST00000120729 834 ntBASIC19.17■□□□□ 0.66
Alx1Q8C8B0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Rprl3-201ENSMUST00000157400 290 ntBASIC19.17■□□□□ 0.66
Alx1Q8C8B0 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.17■□□□□ 0.66
Alx1Q8C8B0 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Alx1Q8C8B0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx1Q8C8B0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx1Q8C8B0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Alx1Q8C8B0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Alx1Q8C8B0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms