Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.02■□□□□ 0.95
Ccdc60Q8C4J0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc60Q8C4J0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc60Q8C4J0 Haglr-201ENSMUST00000100000 2085 ntBASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc60Q8C4J0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc60Q8C4J0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc60Q8C4J0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc60Q8C4J0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc60Q8C4J0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms