Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp44Q8C2S0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Gm15794-201ENSMUST00000120182 631 ntBASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp44Q8C2S0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp44Q8C2S0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Usp44Q8C2S0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Gm45328-201ENSMUST00000210942 917 ntBASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp44Q8C2S0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp44Q8C2S0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Gm10052-201ENSMUST00000168019 960 ntBASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Gm7729-201ENSMUST00000050143 801 ntBASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp44Q8C2S0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms