Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scfd1Q8BRF7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scfd1Q8BRF7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scfd1Q8BRF7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Gm6296-201ENSMUST00000222599 943 ntBASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scfd1Q8BRF7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Gm18195-201ENSMUST00000207604 706 ntBASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scfd1Q8BRF7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44357-201ENSMUST00000195897 142 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm19658-201ENSMUST00000196231 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44367-201ENSMUST00000196836 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44350-201ENSMUST00000197197 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44390-201ENSMUST00000197533 144 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44313-201ENSMUST00000198018 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44486-201ENSMUST00000198508 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44314-201ENSMUST00000199263 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44394-201ENSMUST00000199558 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44484-201ENSMUST00000199873 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44466-201ENSMUST00000200264 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm44359-201ENSMUST00000200671 138 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Gm6376-201ENSMUST00000209407 580 ntBASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scfd1Q8BRF7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Scfd1Q8BRF7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scfd1Q8BRF7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms