Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip4Q8BQP8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Gm26039-201ENSMUST00000158152 144 ntBASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Gm29518-201ENSMUST00000190858 372 ntBASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rab11fip4Q8BQP8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rab11fip4Q8BQP8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rab11fip4Q8BQP8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rab11fip4Q8BQP8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.21■□□□□ 0.5
Rab11fip4Q8BQP8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Gm17808-201ENSMUST00000200859 894 ntBASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip4Q8BQP8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab11fip4Q8BQP8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms