Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco3Q8BQM7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco3Q8BQM7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gm44549-201ENSMUST00000208351 577 ntBASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gm10033-202ENSMUST00000211874 928 ntBASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smco3Q8BQM7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smco3Q8BQM7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms