Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Col16a1Q8BLX7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col16a1Q8BLX7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col16a1Q8BLX7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col16a1Q8BLX7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col16a1Q8BLX7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col16a1Q8BLX7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col16a1Q8BLX7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.47■■□□□ 1.03
Col16a1Q8BLX7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Col16a1Q8BLX7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Col16a1Q8BLX7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.45■■□□□ 1.02
Col16a1Q8BLX7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms