Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp2bQ8BJF9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp2bQ8BJF9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp2bQ8BJF9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp2bQ8BJF9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2bQ8BJF9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2bQ8BJF9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp2bQ8BJF9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms